numpy
pandas
dsp-pandas
vuecore
scipy
scikit-learn>=1.2
networkx
biopython
combat
gseapy!=1.1.5
kmapper
lifelines
pingouin
python-louvain
PyWGCNA!=2.2.0
snfpy
umap-learn
statsmodels
inmoose
requests
rarfile

[dev]
black
flake8
ruff
isort
pytest
pytest-cov
twine
wheel
jupytext
ipykernel

[docs]
sphinx
sphinx-book-theme
myst-nb
ipywidgets
sphinx-new-tab-link!=0.2.2
jupytext
